MBS 337: Research Computing in Biology
======================================

The objective of this course is to give students practical experience with
essential computing skills used in modern biological research settings. The
course teaches core principles of research software engineering,
reproducibility, automation, scientific data management, development and
operations (DevOps), cloud computing, and high-performance computing to address
real-world applications in bioimaging, genomics, protein folding, and drug
discovery. By the end of the course, students will be equipped to design,
implement, and share robust computational pipelines for a variety of biological
research problems.


.. toctree::
   :maxdepth: 1
   :caption: Course Schedule:

   unit01/overview
   unit02/overview
   unit03/overview
   unit04/overview
   unit05/overview
   unit06/overview
   unit07/overview
   unit08/overview
   unit09/overview
   unit10/overview
   unit11/overview
   unit12/overview


.. toctree::
   :maxdepth: 1
   :caption: Homeworks:

   homework/homework01
   homework/homework02
   homework/homework03
   homework/homework04
   homework/homework05
   homework/homework06
   homework/homework07
   homework/midterm
   homework/homework08
   homework/homework09
   homework/homework10
   homework/final


.. toctree::
   :maxdepth: 1
   :caption: Help:

   faq/faq


Additional Resources:
---------------------

* Slack: https://tacc-learn.slack.com/
* Class Docs: https://mbs-337-sp26.readthedocs.io/
* Canvas: https://utexas.instructure.com/